Selected publications

A guided route through the research.

Rather than opening with a wall of citations, this page foregrounds papers that explain the main questions, approaches and collaborations. The complete searchable list remains available.

03
106publications
41H-index
83i10-index
4,835citations

These metrics are retained from the previous Pascoe Lab site as a snapshot, not presented as live values. Use Google Scholar, ORCID and Crossref for current records.

03

Selected record

Eight papers that map the programme.

Global enteric genomics · Protocols

Protocols for genomic epidemiology and source attribution of enteric bacteria causing diarrhoeal disease across Africa

BMJ Open · 2026

A shared framework for coordinated One Health sampling, microbiology, sequencing and analysis across multiple African study settings.

Campylobacter · AMR · Peru

Sharing of cmeRABC alleles between C. coli and C. jejuni associated with extensive drug resistance

mBio · 2025

Connects interspecies genetic exchange to clinically important resistance in infant and poultry isolates from the Peruvian Amazon.

Source attribution · Machine learning

Machine learning to attribute the source of Campylobacter infections in the United States

Journal of Infection · 2024

Demonstrates how genomic surveillance can quantify the likely livestock and environmental origins of human infection at national scale.

Child health · Persistent infection

The epidemiology and impact of persistent Campylobacter infections on childhood growth

eClinicalMedicine · 2024

Places repeated and persistent detection in a multi-country child-health context rather than treating infection as a single acute event.

One Health · Wildlife

Proximity to humans is associated with antimicrobial-resistant enteric pathogens in wild-bird microbiomes

Current Biology · 2024

Shows how human-altered ecology can structure lineage and resistance diversity in wildlife-associated bacteria.

Vaccines · Poultry

Genomic tailoring of autogenous poultry vaccines to reduce Campylobacter from farm to fork

npj Vaccines · 2024

Uses population genomics to improve the match between vaccine design and the bacterial diversity circulating in poultry production.

Bacterial evolution · Recombination

Epistasis, core-genome disharmony, and adaptation in recombining bacteria

mBio · 2024

Examines how interactions across the genome constrain and enable adaptation in highly recombining bacterial populations.

Campylobacter ecology · Recombination

Host ecology regulates interspecies recombination in bacteria of the genus Campylobacter

eLife · 2022

Links genetic exchange between species to the ecological settings in which bacterial populations meet.

Behind the papers

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