GETcampy
Genomic epidemiology of childhood enteric disease
One Health sampling and pathogen genomics across children, households, animals, food and environmental exposures.
Active outputsAfricaCampylobacter
Open projectProjects
Programmes built around shared questions and long-term partnerships.
The projects differ in geography and scale, but share a commitment to coordinated sampling, population-aware analysis and usable public-health outputs.
CCC
Campylobacter Control Campaign
A collaborative platform connecting surveillance, genomics, source attribution, modelling, training and prevention.
Growing networkOne HealthIntervention
Open project
HU-RIZON
Wildlife, poultry and AMR ecology
Metagenomic analysis of how wildlife movement and human-influenced environments structure microbial communities and resistance.
Analysis phaseMetagenomicsWild birds
Open projectProject architecture
Each programme links five layers.
- A biological or public-health question
- A sampling frame that represents the relevant population
- Laboratory methods that are portable and comparable
- Analysis that handles population structure and uncertainty
- Outputs that partners can reuse for surveillance, training or intervention
Connected programmes
Additional research threads
Peruvian C. coli evolution
Population structure, disease association, antimicrobial resistance and poultry-linked emergence in the Peruvian Amazon.
National source attribution
Machine-learning attribution of human infections using genomic surveillance from food, livestock and wildlife reservoirs.
Clinical and device-associated pathogens
Genomic investigation of staphylococci, Acinetobacter and other pathogens where lineage and resistance influence outcomes.